Del 498 - Methods in Enzymology

Synthetic Biology, Part B

Computer Aided Design and DNA Assembly

Inbunden, Engelska, 2011

Av Chris Voigt

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Synthetic biology encompasses a variety of different approaches, methodologies and disciplines, and many different definitions exist. This Volume of Methods in Enzymology has been split into 2 Parts and covers topics such as Measuring and Engineering Central Dogma Processes, Mathematical and Computational Methods and Next-Generation DNA Assembly and Manipulation.

Encompasses a variety of different approaches, methodologies and disciplines
Split into 2 parts and covers topics such as measuring and engineering central dogma processes, mathematical and computational methods and next-generation DNA assembly and manipulation

Produktinformation

Utgivningsdatum2011-07-15
Mått152 x 229 x undefined mm
Vikt1 010 g
FormatInbunden
SpråkEngelska
SerieMethods in Enzymology
Antal sidor550
FörlagElsevier Science
ISBN9780123851208

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Biokemisk teknik inom Naturvetenskap och teknik

Voigt / MIE VolTable of ContentsSynthetic biology, Part BSubtitle: Computer Aided Design and DNA AssemblySection I. Mathematical and Computational Methods DNA-binding specificity prediction with FoldXAlejandro D. Nadra, Luis Serrano, Andreu AlibésThe Ribosome Binding Site CalculatorHoward M. SalisDesigning Genes for Successful Protein ExpressionMark Welch, Alan Villalobos, Claes Gustafsson and Jeremy MinshullApplication of Metabolic Flux Analysis in Metabolic EngineeringSang Yup Lee, Jong Myoung Park and Tae Yong KimSection II. Grammars, Languages, and Computer-Aided DesignClotho: A Software Platform for the Creation of Synthetic Biological SystemsSwapnil Bhatia, Bing Xia, Ben Bubenheim, Maisam Dadgar, Douglas Densmore and J. Christopher AndersonSynBioSS-Aided Design of Synthetic Biological ConstructsYiannis N. KaznessisThe Eugene Language for Synthetic BiologyLesia Bilitchenko, Adam Liu, Douglas DensmoreA step by step introduction to rule-based design of synthetic genetic constructs using GenoCADMandy L. Wilson, Russell Hertzberg, Laura Adam, Jean PeccoudMethods for open innovation on a genome-design platform associating scientific, commercial, and educational communities in synthetic biologyTetsuro ToyodaSection III. Next-Generation DNA Assembly and ManipulationRecursive construction and error correction of DNA molecules and libraries from synthetic and natural DNATuval Ben Yehezkel and Ehud ShapiroIndustrial scale gene synthesisFrank Notka, Michael Liss & Ralf WagnerChemical DNA Synthesis: Methods and ApplicationsRandall A. Hughes, Aleksandr E. Miklos, and Andrew D. EllingtonAssembly of BioBrick standard biological parts using three antibiotic assemblyReshma Shetty, Meagan Lizarazo, Randy Rettberg, and Thomas F. Knight, JrGenetic Assembly Tools for Synthetic BiologyBillyana Tsvetanova, Lansha Peng, Xiquan Liang, Ke Li, Jian-Ping Yang, Tony Ho, Josh Shirley, Liewei Xu, Jason Potter, Wieslaw Kudlicki, Todd Peterson, and Federico KatzenEnzymatic assembly of overlapping DNA fragmentsDaniel G. GibsonAutomated assembly of standard biological partsMariana Leguia, Jennifer Brophy, Douglas Densmore and J. Christopher AndersonMEGAWHOP Cloning: A method of creating random mutagenesis libraries via megaprimer PCR of whole plasmidsKentaro MiyazakiSection III. Genome-scale EngineeringRapid and Multiplexed Genome Engineering and Genotyping Methods: Applications for Synthetic Biology and Protein and Pathway EngineeringHarris H. Wang and George M. ChurchConstruction and manipulation of giant DNA by a genome vectorMitsuhiro ITAYA and Kenji TSUGEMapping E. coli RNA Polymerase and associated transcription factors and identifying promoters genome-wide Sarah E. Davis, Rachel A. Mooney, Elenita I. Kanin, Jeff Grass, Robert Landick and Aseem Z. Ansari