Comparative Genomics

Methods and Protocols

Inbunden, Engelska, 2024

Av João Carlos Setubal, Peter F. Stadler, Jens Stoye, Joao Carlos Setubal

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This second edition provides new and updated chapters covering computational and mathematical techniques and concepts related to the field of comparative genomics.

Produktinformation

Utgivningsdatum2024-06-01
Mått178 x 254 x 40 mm
Vikt1 373 g
FormatInbunden
SpråkEngelska
SerieMethods in Molecular Biology
Antal sidor621
Upplaga2
FörlagSpringer-Verlag New York Inc.
ISBN9781071638378

Tillhör följande kategorier

Biovetenskap inom Naturvetenskap och teknik

The theory of gene family histories.- Protein-coding gene families in prokaryote genome comparisons.- Family-free genome comparison.- Methods for pangenomic core detection.- Step-by-step bacterial genome comparison.- How to obtain and compare Metagenome-Assembled Genomes.- Comparative genome annotation.- Annotation and comparative genomics of Prokaryotic Transposable Elements.- Genome Rearrangement Analysis: Cut and Join Genome Rearrangements and Gene Cluster Preserving Approaches.- AGO, a framework for the reconstruction of ancestral syntenies and gene orders.- A guide to phylogenomic inference.- Comparative RNA Genomics.- Bioinformatic approaches for comparative analysis of viruses.- Comparative Analyses of Bacteriophage Genomes.- Comparative genomics of sex, chromosomes, and sex chromosomes in Caenorhabditis elegans and other nematodes.- Comparative evolutionary genomics in insects.- Comparative Methods for Demystifying Spatial Transcriptomics.- Comparative genomic analysis of bacterial data in BV-BRC: an example exploring antimicrobial resistance.- VEuPathDB resources: a platform for free online data exploration, integration, and analysis.- A practical approach to using the Genomic Standards Consortium MIxS reporting standard for comparative genomics and metagenomics.