Del 0 - Methods in Molecular Biology

Data Production and Analysis in Population Genomics

Methods and Protocols

Häftad, Engelska, 2016

AvFrançois Pompanon,Aurélie Bonin,Francois Pompanon,Aurelie Bonin

1 699 kr

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Population genomics is a recently emerged discipline, which aims at understanding how evolutionary processes influence genetic variation across genomes.

Produktinformation

Utgivningsdatum2016-08-23
Mått178 x 254 x 20 mm
Vikt663 g
FormatHäftad
SpråkEngelska
SerieMethods in Molecular Biology
Antal sidor337
FörlagHumana Press Inc.
ISBN9781493959136

Tillhör följande kategorier

Sampling in Landscape Genomics.- oligoTag: A Program for Designing Sets of Tags for Next-Generation Sequencing of Multiplexed Samples.- SNP Discovery in Non-Model Organisms Using 454 Next Generation Sequencing.- ISIF (In Silico Fingerprinting): A User-Friendly in silico AFLP Program.- Diversity Arrays Technology (DArT) – A Generic Genome Profiling Technology on Open Platforms.- Two Methods to Easily Obtain Nucleotide Sequences from AFLP Loci of Interest.- Roche Genome Sequencer FLX Based High-Throughput Sequencing of Ancient DNA.- Preparation of Normalized cDNA Libraries for 454 Titanium Transcriptome Sequencing.- RAD Paired-End Sequencing for Local de novo Assembly and SNP Discovery in Non-Model Organisms.- Automated Scoring of AFLPs Using RawGeno v 2.0, A Free R CRAN Library.- Haplotype Inference.- Allele Identification in Assembled Genomic Sequence Datasets.- Multiple-Testing in Large-Scale Genetic Studies.- Population Genomic Analysis of Model and Non-Model Species Using Sequenced RAD Tags.- Analysis and Management of Gene and Allelic Diversity in Subdivided Populations Using the Software Program METAPOP.- DETSEL: An R-Package to Detect Marker Loci Responding to Selection.- Use of Qualitative Environmental and Phenotypic Variables in the Context of Allele Distribution Models: Detecting Signatures of Selection in the Genome of Lake Victoria Cichilds.- Genomic Scan as a Tool for Assessing the Genetic Component of Phenotypic Variance in Wild Populations.

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