Insect Genomics

Methods and Protocols

Inbunden, Engelska, 2025

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Beginning with obtaining a high-quality genome assembly using the latest sequencing data, the book continues with the identification of genome variability including single nucleotide polymorphisms and genomic inversions, and the annotation of insect genomes through genes, transposable elements, and piRNA clusters.

Produktinformation

Utgivningsdatum2025-08-20
Mått178 x 254 x 29 mm
Vikt996 g
FormatInbunden
SpråkEngelska
SerieMethods in Molecular Biology
Antal sidor416
FörlagSpringer-Verlag New York Inc.
ISBN9781071645826

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De Novo Genome Assembly Using Long Reads and Chromosome Conformation Capture.- Identification of Single Nucleotide Polymorphism from Insect Genomic Data.- npstat: An Efficient Tool to Explore the Population Genome Variability and Divergence Using Pool Sequencing Data.- Navigating Eukaryotic Genome Annotation Pipelines: A Route Map to Using BRAKER, Galba, and TSEBRA.- A Concise Guide for the Characterization and Curation of Transposable Elements in Insect Genomes.- Annotation of piRNA Source Loci in the Genome of Non-Model Insects.- The Influence of Chromosomal Inversions on Genetic Variation and Clinal Patterns in Genomic Data of Drosophila melanogaster.- Evolutionary Genomics of Gene Families: A Case Study of Insect Gustatory Receptors.- Insect Phylogenomics: From Experiment Planning to Post-Phylogenetic Analyses.- High-Throughput Amplicon Sequencing for Analyzing Microbial Communities of Insects.- An Optimized SPLiT-Seq Protocol for Insects.- Identification of Sex-Specific and Sex-Biased Transcripts for Genetic Sexing.- Characterization of Mosquito Salivary Components.- History of Mosquito Transgenesis: A Perspective in Review.- Manipulation of a New Non-Model Insect Genome Using Targeted CRISPR-Era Approaches.- Adapting and Testing ReMOT Control for Expanded CRISPR-Era Genome Functions in Non-Model Insects.