Genotyping by Sequencing for Crop Improvement

Humira Sonah, National Agri-Food Biotechnology Institute, Punjab, India Vinod Goyal, CCS Haryana Agriculture University, Hisar, India S. M. Shivaraj, Laval University, Quebec City, Canada Rupesh K. Deshmukh, Ramalingaswami Fellow, National Agri-Food Biotechnology Institute, Punjab, India

• Chapter 1: Molecular marker techniques and recent advancementsDharminder Bhatia and Gagandeep Singh BajwaChapter 2: High-throughput genotyping platformsSandhya Sharma, Kuldeep Kumar, Kishor Tribhuvan, Reeta, Sandeep Kumar, Priyanka Jain, Swati Saxena, Joshita Vijayan, Harsha Shrivastava and Kishor GaikwadChapter 3: Opportunity and challenges for whole genome re-sequencing based genotyping in plantsSurbhi Kumawat, Gaurav Raturi, Pallavi Dhiman, Sreeja Sudhakarn, Nitika Rajora, Vandana Thakaral, Himanshu Yadav, Gunashri Padalkar, Yogesh Sharma, Vinaykumar Rachappanavar and Manish KumarChapter 4:  QTL mapping using advanced mapping populations and high-throughput genotypingSweta Sinha*, Brij Kishore Kushwaha and Rupesh DeshmukhChapter 5: Genome-wide association study: approaches, applicability, and challengesAkshay S Sakhare, Suneetha Kota, Santosh Rathod, Brajendra Parmar and Viswanathan CChapter 6: Genotyping of seeds while preserving their viabilityVinaykumar Rachappanavar, J K Sharma and Himanshu PChapter 7: Genomic selection: Advances, applicability, and challengesNaina Garewal, Riya Joon, Ravneet Kaur and Kashmir SinghChapter 8: Analytical pipelines for the GBS analysisVinaykumar Rachappanavar, J K Sharma and Himanshu PChapter 9: Recent advances and applicability of GBS, GWAS, and GS in maizeAnshuman Tiwari, Shalu Choudhary, Jayendra Padiya, Abhijit Ubale, Venugopal Mikkilineni and Bharat CharChapter 10: Recent advances and applicability of GBS, GWAS, and GS in soybeanPrashant Raghunath Shingote, Dhananjay Narayanrao Gotarkar, Ravindra Ramrao Kale, Omkar Limbalkar, and Dhiraj Lalji WasuleChapter 11: Advances and applicability of genotyping technologies in cotton improvementShubham Bhardwaj, Vikas Devkar*, Amit Kumar, Alisha, Shivani Sharma, Rupesh K. Deshmukh and Gunvant B PatilChapter 12: Recent advances and applicability of GBS, GWAS, and GS in millet cropsPankaj S. Mundada¥, Swapnil B. Kadam¥, Anupama A. Pable and Vitthal T. BarvkarChapter 13: Recent advances and applicability of GBS, GWAS, and GS in pigeon peaAnuradha Singh and Nisha SinghChapter 14: Opportunity and challenges for high-throughput genotyping in sugarcanePrathima. P. Thirugnanasambandam, Avinash Singode, Lakshmipathy Talambedu and Senthilkumar ShanmugavelChapter 15: Recent advances and applicability of GBS, GWAS, and GS in polyploid cropsVandana Thakaral,*, Himanshu Yadav, Gunashri Padalkar, Surbhi Kumawat, Gaurav Raturi, Virender Kumar, Rushil Mandlik, Nitika Rajora and Manipal SinghChapter 16: Recent advances and applicability of GBS, GWAS, and GS in oilseed cropsSanskriti Vats*, Yogesh Sharma, Virender Kumar, Rushil Mandlik, Surbhi Kumawat, Himanshu Yadav, Pallavi Dhiman, Vandana Thakral, Md Aminul Islam and Sreeja Sudhakaran